Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015943447.1_cds_XP_016486623.1_77444
CDS Infomation

[gene=LOC107806864] [db_xref=GeneID:107806864] [protein=glycerol-3-phosphate dehydrogenase SDP6, mitochondrial-like] [protein_id=XP_016486623.1] [location=complement(join(7651..7947,8876..9134,9974..10134,11756..12087,12599..13072,15937..16300))] [gbkey=CDS]
Sequence

ATGGCCACCTCCATTCGCCTCCGTCGTCTCGGCGCTATCGCCGTCGTAGCCGGTGGAGCA
TACACAATTGTACGGAATCCTTCATTCTCATCAAACGACCGCGGCGACAAGTCCACTGCA
CTCGACACCTTCCGCCGGAAAATTGCTGATCCTTTCGCCGTAGTTCCGTCTCGAGCCACT
CAGGAAGCGGCTCTGATCGGCTCCAGCTTGTCAAATCCTCTCGACATCCTTGTTGTCGGT
GGCGGTGCCACCGGCTGCGGTGTCGCACTTGATGCTGCAACGCGTGGGCTCCGTGTTGGC
CTTGTCGAACGAGATGATTTTTCTTCTGGCACTTCTTCAAGGTCCACTAAGTTAATTCAT
GGAGGAGTTCGCTATTTGGAGAAAGCAGTTTTCAACTTAGATTACGGGCAGTTAAAGCTA
GTTTTCCATGCCCTAGAGGAGCGTAAACAGGTCATTGACAATGCTCCGCACCTTTGTCAT
GCTTTACCATGCATGACTCCTTGTTTTGATTGGTTTGAAGCGATCTACTACTGGGCCGGC
CTGAAAATGTATGATCTGGTCGCGGGGCGACACCTACTGCATTTGTCTAGGTATTATTCT
GCACAAGAGTCTGTTGAATTGTTTCCTACCCTTGCACGAAATGGTAAAGATAAAACTCTG
AAGGGAACTGTGGTATATTATGATGGACAAATGAACGACTCGCGCCTCAATGTTGCAATA
GCATGCTCTGCTGCTTTGGCTGGTGCAGCAGTGCTTAACCATGCAGAGGTTGTATCCCTT
CTCAAAGATGAGGGTGATGGTAGAATAATTGGTGCACGTATTCGGAACAACTTGTCAGGT
AAGGAGTTTGATGCATATGCAAAAGTTGTTGTTAATGCTGCTGGGCCCTTTTGTGATGCT
GTACGGAAGTTGGCTGATAAAGATGCAAAACCCATGATCTGTCCCAGTAGTGGTGTTCAT
GTTGTACTTCCTGATTACTATTCTCCAGACGGAATGGGCTTAATTGTCCCGAAAACTAAG
GATGGTCGAGTGGTTTTTATGCTTCCATGGTTGGGTAGAACAGTAGCTGGTACTACTGAT
TCAAACACCAGCATAACGATGCTGCCAGAACCTCATGAGAATGAGATTGAATTCATTTTG
GATGCCATCTCTGATTATCTTAATGTTAAGGTACGGCGTACTGATGTCCTATCTGCTTGG
AGTGGTATCCGCCCTCTAGCAATTGATCCCAAGGCAAAGAGTACAGAGAGCATCTCCAGA
GATCATGTTGTCGCTGAAGAGCATCCTGGTTTGGTGACAATTACCGGTGGAAAATGGACT
ACATATAGAAGCATGGCAGAAGATGCGGTTGATGCGGCTATAAAATCTGGAAAATTGAAC
CCAGCGAATAAATGCTTGACATACAACCTACAACTTATAGGTGCAGATGGATGGGAACCT
GCATCTTTTACGATACTTGCTCAACAGTATGTCCGCATGAAAAGGTCACATGGAGGAAAG
GTTGTTCCAGGAGTGATGGACACCGCTGCTGCTAAACATCTATCTCATGCATATGGTGTT
TTGTCTGAACGAGTGGCTGCTATAGCTCAGAACGAAAATTTGGGAAAACGACTGGCACAT
GGATACCCTTTCTTGGAAGCTGAGGTTGCCTACTGTGCTCGGGAAGAGTACTGTGAATCC
GCTGTAGATTTTGTAGCTAGAAGATGTCGTCTTGCCTTCCTCGACACTGATGCTGCACAG
CGAGCACTGCCACGAATAATAGAGATACTGGCTGCAGAGCACAAATGGAACAGGTCTAGG
CAGAAACAAGAGTTGCAGAAGGGAAAACAATTTTTAGAAACTTTCAAGTCATCAAAAAAT
GCACAATTCCATGACGGGAAGCATTAG

Peptide Sequence

PEP ID

XP_016486623.1
PEP Infomation

PREDICTED: glycerol-3-phosphate dehydrogenase SDP6, mitochondrial-like [Nicotiana tabacum]
Sequence

MATSIRLRRLGAIAVVAGGAYTIVRNPSFSSNDRGDKSTALDTFRRKIADPFAVVPSRAT
QEAALIGSSLSNPLDILVVGGGATGCGVALDAATRGLRVGLVERDDFSSGTSSRSTKLIH
GGVRYLEKAVFNLDYGQLKLVFHALEERKQVIDNAPHLCHALPCMTPCFDWFEAIYYWAG
LKMYDLVAGRHLLHLSRYYSAQESVELFPTLARNGKDKTLKGTVVYYDGQMNDSRLNVAI
ACSAALAGAAVLNHAEVVSLLKDEGDGRIIGARIRNNLSGKEFDAYAKVVVNAAGPFCDA
VRKLADKDAKPMICPSSGVHVVLPDYYSPDGMGLIVPKTKDGRVVFMLPWLGRTVAGTTD
SNTSITMLPEPHENEIEFILDAISDYLNVKVRRTDVLSAWSGIRPLAIDPKAKSTESISR
DHVVAEEHPGLVTITGGKWTTYRSMAEDAVDAAIKSGKLNPANKCLTYNLQLIGADGWEP
ASFTILAQQYVRMKRSHGGKVVPGVMDTAAAKHLSHAYGVLSERVAAIAQNENLGKRLAH
GYPFLEAEVAYCAREEYCESAVDFVARRCRLAFLDTDAAQRALPRIIEILAAEHKWNRSR
QKQELQKGKQFLETFKSSKNAQFHDGKH

Transcript Sequence

Gene sequence data has not been registered.